Šarūnė recently started her Erasmus+ internship in the group. She will characterise a variety of fluidic devices that we got our hands on including devices for high throughput smFRET screening, trapping of bacteria and establishing DNA curtains. Elmar started his MSc thesis and will utilise new DNA constructs for smFRET based studies of ARF transcription factor binding.
Great to see so many people joining the group. Abbas started his PhD thesis on super-resolution based localisation of biomolecules at food-related interfaces. Ben (BSc thesis, BIP) started illuminating bacteria using the PAINT technique. Vincent (MSc thesis, BIP) supports Koen in his quest to monitor particle diffusion in meat replacers. Last but not least, Sven (BSc thesis with BIC & BIP) will study the influence of control elements to the transcription factor binding.
Some PAINT data by Ben
Suyeon joined the group in November 2018 for her PhD thesis. She will study lipid oxidation at oil/water interfaces using super-resolution microscopy. George just started his MSc thesis to study diffusion of dCas9 in Lactococcus lactis using single-particle tracking PALM.
Our open (single-molecule) microscopy project, the #miCube, is now on Github [link]! The page shows a detailed and updated overview of the components, some information on phasor-based SMLM, and many links to similar open hardware projects.
Meike joined the group for her BSc thesis and will work on DNA polymerase beta. Carel successfully defended his PhD thesis in March and decided to continue working on DNA polymerase beta by joining the Sweasy lab at Yale as a postdoctoral research assistent. All the best and we hope receiving new stocks soon!
…who joined the group for an 6 week internship (Andreas) and a short capita selecta (Hans). Andreas will try unifying some fragmented software packages for in vivo single particle tracking. Hans will push the limits of our ultrafast pSMLM algorithm for super-resolution microscopy.
Good news! The proposal “LocalBioFood: Localisation of bio-macromolecules in food matrices” submitted by Ilja Voets (TU/e) and our lab has been granted by the NWO innovation fund for chemistry [link].
Within the project, the three appointed PhD students will image different components in food, like proteins and carbohydrates, on a sub 100nm length scale using advanced fluorescence microscopy. The project is a collaboration between Eindhoven University of Technology, Wageningen University, Confocal.nl, Unilever and DSM.